[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 50 items for (author: sherpa & d)

EMDB-19039:
Map of YPEL5-bound WDR26 dimer obtained by focused refinement of the WDR26-CTLH subcomplex
Method: single particle / : Chrustowicz J, Schulman BA

EMDB-17705:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class I
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17706:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class II
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17707:
Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class III
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17709:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class V
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17710:
Structure of Chelator-GIDSR4 - Fbp1 - phospho-Ubc8~ubiquitin - class IV
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17713:
Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

EMDB-17715:
SRS and Cat modules of human CTLHSR4 bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17716:
Structure of CTLHSR4 - phospho-UBE2H~ubiquitin bound to engineered VH
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17717:
SRS and Cat modules of yeast Chelator-GIDSR4 bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-17764:
Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

PDB-8pjn:
Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

PDB-8pmq:
Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin
Method: single particle / : Chrustowicz J, Sherpa D, Prabu RJ, Schulman BA

EMDB-16242:
Cryo-EM structure of RANBP10-CTLH SR4 complex
Method: single particle / : Sherpa D, Chrustowicz J

EMDB-16243:
Cryo-EM map of ARMC8-specific nanobody bound to CTLH-SR4
Method: single particle / : Chrustowicz J, Sherpa D

EMDB-14323:
Structure of Chelator-GIDSR4 bound to Mdh2
Method: single particle / : Sherpa D, Chrustowicz J, Schulman B

EMDB-14324:
Structure of Cage-GIDSR4 bound to PHSVTP-Fbp1
Method: single particle / : Chrustowicz J, Sherpa D, Qiao S, Schulman B

EMDB-14338:
Structure of endogenous Cage-GIDAnt complex
Method: single particle / : Sherpa D, Chrustowicz J, Qiao S, Schulman B

EMDB-32830:
GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
Method: single particle / : Qiao S, Cheng JD, Schulman BA

EMDB-32831:
Gid12 bound GIDSR4 E3 ubiquitin ligase complex
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32833:
Gid12 bound Chelator-GIDSR4
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32834:
Cage assembly GID E3 ubiquitin ligase
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

EMDB-32835:
Gid12 bound Cage-GIDSR3
Method: single particle / : Qiao S, Cheng DJ, Schulman BA

PDB-7wug:
GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
Method: single particle / : Qiao S, Cheng JD, Schulman BA

EMDB-12537:
Structure of human CTLH SR4 complex
Method: single particle / : Sherpa D, Chrustowicz J, Schulman BA

EMDB-12538:
Structure of endogenous yeast GID Ant complex
Method: single particle / : Sherpa D, Chrustowicz J, Qiao S, Schulman BA

EMDB-12540:
Structure of endogenous yeast Chelator-GID Ant complex
Method: single particle / : Sherpa D, Chrustowicz J, Qiao S, Schulman BA

EMDB-12541:
Structure of Apo Chelator-GID SR4 E3 ubiquitin ligase
Method: single particle / : Sherpa D, Chrustowicz J, Qiao S, Prabu JR, Schulman BA

EMDB-12542:
Structure of human CTLH-WDR26 supramolecular assembly
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-12545:
Structure of supramolecular assembly and substrate receptor scaffolding modules of human CTLH-WDR26 complex
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-12547:
Structure of supramolecular assembly and substrate receptor scaffolding modules of human CTLH-MKLN1 complex
Method: single particle / : Chrustowicz J, Sherpa D, Schulman BA

EMDB-12548:
Structure of GID SR4 complex
Method: single particle / : Sherpa D, Chrustowicz J, Schulman BA

EMDB-12557:
Structure of yeast Chelator-GID SR4 E3 ubiquitin ligase bound to its tetrameric metabolic enzyme substrate Fbp1
Method: single particle / : Chrustowicz J, Sherpa D, Prabu JR, Schulman BA

EMDB-12559:
Substrate receptor scaffolding module of yeast Chelator-GID SR4 E3 ubiquitin ligase bound to Fbp1 substrate
Method: single particle / : Sherpa D, Chrustowicz J, Prabu JR, Schulman BA

EMDB-12560:
Catalytic module of yeast Chelator-GID SR4 E3 ubiquitin ligase
Method: single particle / : Sherpa D, Chrustowicz J, Prabu JR, Schulman BA

EMDB-12563:
Supramolecular assembly module of yeast Chelator-GID SR4 E3 ubiquitin ligase
Method: single particle / : Chrustowicz J, Sherpa D, Prabu JR, Schulman BA

EMDB-12564:
Substrate receptor scaffolding module of human CTLH E3 ubiquitin ligase
Method: single particle / : Chrustowicz J, Sherpa D, Prabu JR, Schulman BA

PDB-7ns3:
Substrate receptor scaffolding module of yeast Chelator-GID SR4 E3 ubiquitin ligase bound to Fbp1 substrate
Method: single particle / : Sherpa D, Chrustowicz J, Prabu JR, Schulman BA

PDB-7ns4:
Catalytic module of yeast Chelator-GID SR4 E3 ubiquitin ligase
Method: single particle / : Sherpa D, Chrustowicz J, Prabu JR, Schulman BA

PDB-7nsb:
Supramolecular assembly module of yeast Chelator-GID SR4 E3 ubiquitin ligase
Method: single particle / : Chrustowicz J, Sherpa D, Prabu JR, Schulman BA

PDB-7nsc:
Substrate receptor scaffolding module of human CTLH E3 ubiquitin ligase
Method: single particle / : Chrustowicz J, Sherpa D, Prabu JR, Schulman BA

EMDB-10326:
Structure of inactive GID E3 ubiquitin ligase complex
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10327:
Structure of active GID E3 ubiquitin ligase complex
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10328:
Structure of GID Scaffold subcomplex
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10329:
Structure of GID Scaffold subcomplex bound to substrate receptor Gid10
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10330:
Structure of GID Scaffold Subcomplex bound to substrate receptor Gid4
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10331:
Structure of endogenous inactive GID E3 ubiquitin ligase complex
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10332:
Structure of active GID E3 ubiquitin ligase complex with RING domains deletion
Method: single particle / : Qiao S, Prabu JR, Schulman BA

EMDB-10333:
Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain
Method: single particle / : Qiao S, Prabu JR, Schulman BA

PDB-6swy:
Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain
Method: single particle / : Qiao S, Prabu JR, Schulman BA

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more